Lung-associated mesenchyme development

pathway activity — cross-omics
GO:0060484Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Lung-associated mesenchyme development pathway is significantly associated with the protein abundance of multiple proteins, with the PDAC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are SERPINB5, UBASH3B, and STK10, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACSERPINB5 →+0.667+0.067.002<.00135
OVUBASH3B →-0.411-0.083<.001<.00134
HNSCSTK10 →-0.346-0.101.002.00334
PDACTACC2_S317 →+0.936+0.086.002.00234
HNSCVANGL2 →+0.507+0.083<.001.00534
LSCCCLCN7 →-0.218-0.111<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration