Lung lobe development

pathway activity — cross-omics
GO:0060462Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Lung lobe development pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are VASN, MYL9, and MAP7D1, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVVASN →-1.042-0.236.007.00734
LSCCMYL9 →-0.680-0.255<.001.00533
BRCAMAP7D1 →-0.476-0.418<.001.00333
LSCCBCL11A →+0.719+0.333.002.00433
BRCAARPC1B →-0.261-0.567.001.00133
LSCCTHSD1 →-0.421-0.273.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration