Positive regulation of cardiac muscle contraction

pathway activity — cross-omics
GO:0060452Cross-omicsSHRNA → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Positive regulation of cardiac muscle contraction pathway is significantly associated with the RNA expression of multiple genes, with the LUNG_SCLC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CTC1, CYTH1, and ARMC7, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, CTC1 grouped by Positive regulation of cardiac muscle contraction-low versus -high activity in LUNG_SCLC.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCCTC1 →+1.261+1.437.001.00235
SKINCYTH1 →+0.595+0.821<.001.00334
PANCREASARMC7 →+0.847+1.538<.001<.00134
SKINAPPBP2 →+0.428+0.869.002.00134
CNSCENPV →+1.903+0.938<.001.00434
LUNG_SCLCDLL4 →+2.705+1.683.002<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

CTC1 by Positive regulation of cardiac muscle contraction activity — LUNG_SCLC

Box plot of CTC1 in Positive regulation of cardiac muscle contraction-low vs -high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration