Lung morphogenesis

pathway activity — cross-omics
GO:0060425Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Lung morphogenesis pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are DPYSL3_S522, SLC25A19, and ZYX_S344, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Lung morphogenesis activity versus DPYSL3_S522 in BRCA (Pearson r = -0.09).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCADPYSL3_S522 →+0.445+0.032.004<.00135
LSCCSLC25A19 →-0.344-0.051<.001.00134
LSCCZYX_S344 →+0.550+0.038.001.00534
LSCCCST3 →+0.249+0.053.001<.00134
BRCAANXA2 →+0.249+0.023.004.00334
LSCCANXA4 →+0.238+0.044.004.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0060425 vs DPYSL3_S522 — BRCA

Per-sample scatter of Lung morphogenesis activity vs DPYSL3_S522 in BRCA.

Explore this scatter interactively →

Exploration