Positive regulation of cell adhesion molecule production

pathway activity — cross-omics
GO:0060355Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of cell adhesion molecule production pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CAV2, CAV1, and NEXN, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCAV2 →+1.113+0.144<.001<.00137
GBMCAV1 →+1.703+0.151<.001<.00136
OVNEXN →+1.017+0.253<.001.00235
OVCMAHP →+0.803+0.307<.001<.00135
BRCAPPP1R3C →+1.857+0.165.001<.00135
BRCAECM2 →+0.987+0.110<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

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