Positive regulation of ryanodine-sensitive calcium-release channel activity

pathway activity — cross-omics
GO:0060316Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of ryanodine-sensitive calcium-release channel activity pathway is significantly associated with the protein abundance of multiple proteins, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are CFL2, FERMT2, and CNN1, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCCFL2 →-0.849-0.132<.001<.00138
COADFERMT2 →-0.684-0.047<.001<.00138
UCECCNN1 →-1.304-0.104<.001<.00138
UCECFLNA →-0.997-0.128<.001<.00138
UCECMYL9 →-1.165-0.130<.001<.00138
UCECSORBS1 →-1.147-0.140<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration