Thyroid-stimulating hormone-secreting cell differentiation

pathway activity — cross-omics
GO:0060129Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Thyroid-stimulating hormone-secreting cell differentiation pathway is significantly associated with the protein abundance of multiple proteins, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are FGF2, STXBP1, and CAVIN1, each associated with the pathway in up to 9 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVFGF2 →+0.899+0.359<.001.00829
BRCASTXBP1 →+0.369+0.065.001.00137
BRCACAVIN1 →+0.811+0.083<.001<.00137
CCRCCSEPTIN4 →+0.386+0.057<.001<.00136
BRCASRPX →+0.521+0.063.006.00636
BRCAWDR36 →-0.388-0.084<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration