Somatotropin secreting cell differentiation

pathway activity — cross-omics
GO:0060126Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Somatotropin secreting cell differentiation pathway is significantly associated with the protein abundance of multiple proteins, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are WNT4, FBLN5, and VIM_S47, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCWNT4 →+1.506+1.097<.001<.00134
PDACFBLN5 →+0.645+0.656.001.00134
LSCCVIM_S47 →-0.457-0.604<.001<.00134
LSCCGLTP →+0.446+0.674<.001<.00134
COADFKBP15_S344 →-0.492-0.117<.001<.00134
OVCOL14A1 →+0.685+0.448.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration