Hard palate development

pathway activity — cross-omics
GO:0060022Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Hard palate development pathway is significantly associated with the protein abundance of multiple proteins, with the PDAC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are SPN, TRIM2, and PRKCB, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACSPN →-0.441-0.063.005.00336
LSCCTRIM2 →+0.698+0.113<.001<.00136
UCECPRKCB →-0.548-0.078<.001.00736
PDACRGS14_S203 →-0.607-0.076<.001<.00135
UCECSTK10 →-0.393-0.107<.001<.00135
PDACTBC1D9_S471 →-0.322-0.054<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration