Glutamate reuptake

pathway activity — cross-omics
GO:0051935Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Glutamate reuptake pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are ST8SIA6, MANCR, and MAP4, each associated with the pathway in up to 3 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADST8SIA6 →+0.396+0.542.005.00933
HNSCMANCR →+0.923+0.571<.001<.00133
HNSCMAP4 →+0.295+0.458.009.00733
OVWNT7A →+1.808+0.548.003.00733
GBMSEC11A →-0.200-0.614.004.00333
GBMC4orf50 →+0.783+0.590<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration