Maintenance of location in cell

Across TCGA patient cohorts, RNA activity of the Maintenance of location in cell pathway is significantly associated with the immune infiltration of multiple features, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated features across cancer lineages are Basophils and Class-switched memory B-cells, each associated with the pathway in up to 1 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, Basophils grouped by Maintenance of location in cell-low versus -high activity in BRCA.

Pathway-associated features by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner feature	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	Basophils →	-0.470	-0.210	.009	.048	3	1
BRCA	Class-switched memory B-cells →	-0.279	-0.192	.035	.033	2	1

Each partner links to its Q-omics profile. Showing the 2 strongest associations by consensus.

Basophils by Maintenance of location in cell activity — BRCA

Explore this box plot interactively →