Obsolete regulation of histone H3-K4 methylation

pathway activity — cross-omics
GO:0051569Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete regulation of histone H3-K4 methylation pathway is significantly associated with the protein abundance of multiple proteins, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are EEF2_T57, LUC7L3, and SMC3, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADEEF2_T57 →-0.301-0.056.005.00137
HNSCLUC7L3 →+0.175+0.079<.001<.00137
LSCCSMC3 →+0.314+0.069<.001<.00136
COADSTAG2 →+0.365+0.066<.001<.00136
HNSCTRRAP →+0.227+0.100<.001.00136
HNSCXPO1 →+0.256+0.104<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration