Establishment of meiotic spindle localization

pathway activity — cross-omics
GO:0051295Cross-omicsPROTEIN-MS → PROTEIN-MSCellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Establishment of meiotic spindle localization pathway is significantly associated with the protein abundance of multiple proteins, with the LUNG_SCLC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are SPECC1L, PRPS2, and USF2, each associated with the pathway in up to 1 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Establishment of meiotic spindle localization activity versus SPECC1L in LUNG_SCLC (Pearson r = -0.68).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCSPECC1L →-0.856-0.505.001<.00131
LUNG_SCLCPRPS2 →-1.388-0.505.001<.00131
LUNG_SCLCUSF2 →-0.984-0.526<.001.00131
LUNG_SCLCAK1 →-0.789-0.505.001<.00131
LUNG_SCLCSCP2 →-0.917-0.505.001<.00131
LUNG_SCLCRPS6KA1 →-1.155-0.483.004.00231
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0051295 vs SPECC1L — LUNG_SCLC

Per-sample scatter of Establishment of meiotic spindle localization activity vs SPECC1L in LUNG_SCLC.

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Exploration