Protein heterotetramerization

pathway activity — cross-omics
GO:0051290Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Protein heterotetramerization pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are PBK, ESCO2, and UBE2T, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Protein heterotetramerization activity versus PBK in LUAD (Pearson r = 0.57).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADPBK →+1.231+0.247<.001<.00138
LUADESCO2 →+0.691+0.232<.001<.00138
LUADUBE2T →+0.940+0.184<.001<.00138
LUADDDIAS →+0.774+0.218<.001<.00138
LUADSPAG5 →+0.901+0.156<.001<.00138
LUADDNA2 →+0.512+0.167<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0051290 vs PBK — LUAD

Per-sample scatter of Protein heterotetramerization activity vs PBK in LUAD.

Explore this scatter interactively →

Exploration