Positive regulation of DNA ligation

pathway activity — cross-omics
GO:0051106Cross-omicsPROTEIN-MS → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of DNA ligation pathway is significantly associated with the protein abundance of multiple proteins, with the COAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are KDM3A, LIG3, and MYH9_S1114, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADKDM3A →+0.668+0.503<.001<.00133
LSCCLIG3 →+0.454+0.245<.001<.00133
COADMYH9_S1114 →-0.744-0.216<.001.00233
LSCCSFSWAP_S604 →+0.459+0.261<.001<.00133
OVSRRM2_S1764 →+3.947+0.271<.001.00724
OVXRCC1_S241 →+0.986+0.789<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration