Regulation of helicase activity

pathway activity — cross-omics
GO:0051095Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of helicase activity pathway is significantly associated with the protein abundance of multiple proteins, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are TP53_S315, TP53, and MSH6, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCTP53_S315 →+1.531+0.056<.001<.00137
LSCCTP53 →+1.439+0.056<.001<.00136
HNSCMSH6 →+0.331+0.064<.001<.00136
UCECIFIT1 →+0.551+0.102<.001<.00136
UCECIFIT3 →+0.559+0.096<.001<.00136
LSCCISG15 →+0.558+0.045.008<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration