Chaperone cofactor-dependent protein refolding

pathway activity — cross-omics
GO:0051085Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Chaperone cofactor-dependent protein refolding pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are FCER1G, RENBP, and AIF1, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMFCER1G →+0.622+0.058<.001<.00137
OVRENBP →+0.443+0.039.002.00436
GBMAIF1 →+0.908+0.081<.001<.00136
GBMLRRC25 →+0.700+0.074<.001<.00136
UCECDOCK11 →+0.403+0.058<.001<.00136
COADCTSL →+0.364+0.033.002<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration