Negative regulation of lipid catabolic process

Across TCGA cell cohorts, RNA activity of the Negative regulation of lipid catabolic process pathway is significantly associated with the RNA expression of multiple genes, with the BREAST cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are STPG3, APLN, and ABCC11, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, STPG3 grouped by Negative regulation of lipid catabolic process-low versus -high activity in BREAST.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BREAST	STPG3 →	+0.633	+0.540	.004	.006	3	5
CNS	APLN →	-1.414	-0.964	.002	.001	3	5
BREAST	ABCC11 →	+2.797	+0.837	<.001	<.001	3	5
LIVER	GAS6 →	-4.690	-1.573	.001	.001	3	5
LIVER	ANTXR1 →	-4.006	-1.509	.001	.003	3	4
URINARY_TRACT	GLT8D1 →	-0.678	-1.340	.005	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

STPG3 by Negative regulation of lipid catabolic process activity — BREAST

Explore this box plot interactively →