Detection of chemical stimulus involved in sensory perception of taste

pathway activity — cross-omics
GO:0050912Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Detection of chemical stimulus involved in sensory perception of taste pathway is significantly associated with the RNA expression of multiple genes, with the LARGE_INTESTINE cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CERK, DDX25, and DOK1, each associated with the pathway in up to 2 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Detection of chemical stimulus involved in sensory perception of taste activity versus CERK in LARGE_INTESTINE (Pearson r = 0.70).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINECERK →+1.891+1.565.004.00431
LARGE_INTESTINEDDX25 →+0.056+1.944.003.00431
LARGE_INTESTINEDOK1 →+1.180+1.991.001.00531
LARGE_INTESTINESLC19A2 →-0.776-1.565<.001.00431
LARGE_INTESTINEGLYATL2 →+0.067+1.926<.001<.00131
LARGE_INTESTINEACE →+2.474+2.122.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0050912 vs CERK — LARGE_INTESTINE

Per-sample scatter of Detection of chemical stimulus involved in sensory perception of taste activity vs CERK in LARGE_INTESTINE.

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Exploration