Sensory perception of taste

pathway activity — cross-omics
GO:0050909Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Sensory perception of taste pathway is significantly associated with the RNA expression of multiple genes, with the CCRCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are PIGR, TMC5, and CYSLTR1, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Sensory perception of taste activity versus PIGR in CCRCC (Pearson r = 0.34).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCPIGR →+3.197+0.274<.001<.00137
BRCATMC5 →+1.442+0.194.001<.00136
BRCACYSLTR1 →+0.576+0.148<.001<.00136
UCECTGIF2 →-0.658-0.239<.001<.00136
LSCCSLC40A1 →+0.557+0.309<.001<.00136
LUADFOXM1 →-0.806-0.484<.001.00235
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0050909 vs PIGR — CCRCC

Per-sample scatter of Sensory perception of taste activity vs PIGR in CCRCC.

Explore this scatter interactively →

Exploration