Regulation of B cell receptor signaling pathway

pathway activity — cross-omics
GO:0050855Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Regulation of B cell receptor signaling pathway pathway is significantly associated with the RNA expression of multiple genes, with the BLOOD_Lymphoma cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CCDC122, MIR1915HG, and TRIP10, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of B cell receptor signaling pathway activity versus CCDC122 in BLOOD_Lymphoma (Pearson r = 0.47).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaCCDC122 →+1.282+0.965.001.00334
BLOOD_LymphomaMIR1915HG →-0.588-1.773<.001<.00134
PANCREASTRIP10 →+0.971+0.306.005.00134
BLOOD_LymphomaLPXN →+1.933+1.561<.001<.00133
BLOOD_LeukemiaCLCN2 →-0.579-0.886.003.00133
BLOOD_LymphomaACY3 →+2.401+1.289.002.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0050855 vs CCDC122 — BLOOD_Lymphoma

Per-sample scatter of Regulation of B cell receptor signaling pathway activity vs CCDC122 in BLOOD_Lymphoma.

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Exploration