Positive regulation of coagulation

pathway activity — cross-omics
GO:0050820Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of coagulation pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are COL6A3, COL6A1, and COL6A2, each associated with the pathway in up to 10 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of coagulation activity versus COL6A3 in GBM (Pearson r = 0.51).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCOL6A3 →+1.152+0.094<.001<.001310
GBMCOL6A1 →+0.556+0.065<.001<.00139
GBMCOL6A2 →+0.805+0.084<.001<.00139
OVCOPZ2 →+0.757+0.069<.001<.00139
OVSRRM2_T1531 →-0.883-0.057.002.00539
OVFAP →+0.922+0.068<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0050820 vs COL6A3 — GBM

Per-sample scatter of Positive regulation of coagulation activity vs COL6A3 in GBM.

Explore this scatter interactively →

Exploration