"Circadian sleep/wake cycle, sleep"

pathway activity — cross-omics
GO:0050802Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the "Circadian sleep/wake cycle, sleep" pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are SASH3, VAV1, and ADA2, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCASASH3 →-0.483-0.081<.001<.00135
BRCAVAV1 →-0.426-0.079<.001<.00135
BRCAADA2 →-0.495-0.095<.001<.00135
BRCAACAP1 →-0.453-0.065<.001<.00135
BRCAADPRH →-0.325-0.081<.001<.00134
CCRCCCRLF3 →-0.168-0.056.003.00234
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration