Negative regulation of collateral sprouting

pathway activity — cross-omics
GO:0048671Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Negative regulation of collateral sprouting pathway is significantly associated with the protein abundance of multiple proteins, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are CARMIL2_S1381, PLOD1, and BCAS1, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of collateral sprouting activity versus CARMIL2_S1381 in OV (Pearson r = -0.32).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVCARMIL2_S1381 →-1.920-0.075.001<.00137
HNSCPLOD1 →+0.437+0.059<.001.00236
BRCABCAS1 →-1.127-0.043<.001<.00136
BRCABLNK →-0.346-0.044<.001<.00136
PDACPLOD2 →+0.462+0.046.001<.00136
BRCARBM34 →+0.508+0.056<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0048671 vs CARMIL2_S1381 — OV

Per-sample scatter of Negative regulation of collateral sprouting activity vs CARMIL2_S1381 in OV.

Explore this scatter interactively →

Exploration