Regulation of collateral sprouting

pathway activity — cross-omics
GO:0048670Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of collateral sprouting pathway is significantly associated with the protein abundance of multiple proteins, with the PDAC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are IL33, ERRFI1_S251, and TMEM131, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of collateral sprouting activity versus IL33 in PDAC (Pearson r = -0.26).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACIL33 →-0.643-0.056.006.00237
LUADERRFI1_S251 →+0.725+0.060<.001<.00135
HNSCTMEM131 →+0.164+0.052.002<.00135
GBMSSBP1 →+0.373+0.054.002.00435
UCECSORBS3 →-0.459-0.062.003.00435
COADMNDA →+0.836+0.044.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0048670 vs IL33 — PDAC

Per-sample scatter of Regulation of collateral sprouting activity vs IL33 in PDAC.

Explore this scatter interactively →

Exploration