Notochord morphogenesis

pathway activity — cross-omics
GO:0048570Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Notochord morphogenesis pathway is significantly associated with the protein abundance of multiple proteins, with the PDAC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are WNT5A, PECAM1, and BAIAP2L1_S331, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACWNT5A →+0.782+0.090<.001<.00135
LSCCPECAM1 →-0.358-0.088<.001.00235
LUADBAIAP2L1_S331 →+0.629+0.079.001.00135
LUADEGFR →+0.774+0.098<.001<.00135
LSCCNAMPT →+0.830+0.082<.001.00135
LSCCSFN →+0.733+0.118.002<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration