Obsolete post-embryonic animal organ development

pathway activity — cross-omics
GO:0048569Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete post-embryonic animal organ development pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are COL5A1, ITGA11, and NOX4, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADCOL5A1 →+0.770+0.427<.001<.00135
LUADITGA11 →+0.864+0.367<.001.00135
PDACNOX4 →+0.631+0.136.006.00235
LSCCFST →+1.057+0.231.006.00234
BRCAMIR4435-2HG →+0.363+0.147.002.00825
BRCALINC01096 →+0.421+0.127.001.00934
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

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