Paraxial mesoderm formation

pathway activity — cross-omics
GO:0048341Cross-omicsPROTEIN-MS → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Paraxial mesoderm formation pathway is significantly associated with the protein abundance of multiple proteins, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are AUP1_S288, WDR46_S41, and CRACDL_S490, each associated with the pathway in up to 3 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVAUP1_S288 →+0.859+0.912<.001<.00133
OVWDR46_S41 →-0.866-1.028.002<.00133
OVCRACDL_S490 →-0.945-0.575<.001.00233
BRCAGTF2H3 →+0.166+0.330.001<.00133
PDACZSCAN26 →-1.136-0.360.001.00133
GBMSCG2_S104 →-1.120-0.833<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration