Nucleoside monophosphate phosphorylation

pathway activity — cross-omics
GO:0046940Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Nucleoside monophosphate phosphorylation pathway is significantly associated with the RNA expression of multiple genes, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are OAS3, CMPK2, and IFI44L, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCOAS3 →+0.982+0.137<.001.00236
OVCMPK2 →+1.262+0.159<.001<.00136
BRCAIFI44L →+1.192+0.136<.001<.00136
OVIFIH1 →+0.820+0.104.001.00135
HNSCIFIT3 →+1.146+0.157.008<.00135
HNSCOASL →+1.611+0.161<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration