Follicle-stimulating hormone secretion

pathway activity — cross-omics
GO:0046884Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Follicle-stimulating hormone secretion pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are TBX3, NPNT, and ZNF586, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCATBX3 →+1.200+0.767<.001<.00136
BRCANPNT →+1.422+0.768<.001.00135
BRCAZNF586 →+0.688+0.669<.001.00134
HNSCLINC00622 →+0.653+0.623.005<.00134
HNSCMMP11 →+1.521+0.630.004.00134
BRCANFATC4 →+0.733+0.614.002.00334
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration