Development of secondary female sexual characteristics

pathway activity — cross-omics
GO:0046543Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Development of secondary female sexual characteristics pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are TMEM43, NCAPH, and GTPBP3, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVTMEM43 →+0.502+0.752<.001<.00134
UCECNCAPH →+0.779+0.561<.001<.00134
LSCCGTPBP3 →+0.588+0.172<.001.00434
LSCCPIP4K2A →-0.282-0.178.004.00134
UCECRACGAP1 →+0.646+0.410.004.00534
LSCCKIF15 →+0.482+0.152.001.00634
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration