Glycosylceramide biosynthetic process

pathway activity — cross-omics
GO:0046476Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Glycosylceramide biosynthetic process pathway is significantly associated with the protein abundance of multiple proteins, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are UGT8, CAMSAP3_S780, and FILIP1L, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCUGT8 →+0.779+0.073.001<.00137
GBMCAMSAP3_S780 →+0.572+0.076.004<.00134
GBMFILIP1L →-0.468-0.085<.001<.00134
GBMKLC4_S460 →+0.342+0.074.001.00434
GBMLMF2 →-0.329-0.077.009.00834
GBMLOX →-0.849-0.077<.001.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration