Membrane lipid catabolic process

pathway activity — cross-omics
GO:0046466Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Membrane lipid catabolic process pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CYP1B1, KNL1, and PRC1, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCYP1B1 →+1.485+0.299<.001<.00135
LSCCKNL1 →-0.926-0.252<.001<.00135
LSCCPRC1 →-0.548-0.244<.001<.00135
LSCCNPM1P9 →-0.719-0.204<.001<.00135
LSCCCDC7 →-0.869-0.245<.001<.00135
LSCCYEATS4 →-0.623-0.205.001.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration