5-phosphoribose 1-diphosphate metabolic process

pathway activity — tumor vs normal
GO:0046391Tumor vs NormalRNA activityBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RNA activity of the 5-phosphoribose 1-diphosphate metabolic process pathway differs between tumor and matched normal tissue in 11 of the 18 cancer types tested.

The strongest signal is observed in colon adenocarcinoma (COAD), where pathway activity is lower in tumor tissue than in matched normal tissue. In most cancer types, this pathway shows higher activity in tumors, although a few cancer types, such as COAD and KICH, show the opposite pattern, with lower activity in tumor tissue.

COAD, KICH, and HNSC show the most reproducible tumor–normal differences in pathway activity.

Tumor vs normal pathway activity by lineage

Ranked by sampling consensus. Activity change represents the tumor-versus-normal difference in pathway activity on a log2 scale. Positive values indicate higher pathway activity in tumor tissue. The reported p-values are derived from the corresponding differential activity tests.
LineageGenderStageActivity changepSampling consensus
COADMaleAll−0.064<.0019view →
KICHFemaleAll−0.128<.0018view →
HNSCMaleIII,IV+0.068<.0018view →
BLCAAllAll+0.044.0184view →
BRCAFemaleAll−0.016.0074view →
LUADFemaleII,III,IV−0.041.0033view →
PRADAllAll−0.037<.0012view →
LUSCMaleAll+0.028.0082view →
READAllAll−0.060.0101view →
KIRPAllAll+0.032.0171view →
KIRCMaleAll+0.016.0101view →
Pink = more active in tumor, green = less active in tumor. Showing the 11 strongest of 11 lineages.

GO:0046391–COAD

Tumor-vs-normal pathway-activity box plot for 5-phosphoribose 1-diphosphate metabolic process in COAD.

Open the COAD breakdown →

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