Regulation of transcription by glucose

pathway activity — cross-omics
GO:0046015Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of transcription by glucose pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MTM1, TMEM119, and DHRS7, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of transcription by glucose activity versus MTM1 in LUAD (Pearson r = -0.21).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADMTM1 →-0.297-0.610.002.00234
BRCATMEM119 →-1.062-0.675.001.00634
LUADDHRS7 →-0.484-0.782<.001<.00133
LUADTNFSF10 →-0.560-0.503.001.00233
LUADPRRG1 →-0.290-0.503.004.00233
LUADMSI2 →+0.379+0.599<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0046015 vs MTM1 — LUAD

Per-sample scatter of Regulation of transcription by glucose activity vs MTM1 in LUAD.

Explore this scatter interactively →

Exploration