Negative regulation of smooth muscle contraction

pathway activity — tumor vs normal
GO:0045986Tumor vs NormalRNA activityBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RNA activity of the Negative regulation of smooth muscle contraction pathway differs between tumor and matched normal tissue in 12 of the 18 cancer types tested.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where pathway activity is higher in tumor tissue than in matched normal tissue. In most cancer types, this pathway shows higher activity in tumors, although a few cancer types, such as UCEC and LUSC, show the opposite pattern, with lower activity in tumor tissue.

HNSC, UCEC, and LUSC show the most reproducible tumor–normal differences in pathway activity.

Tumor vs normal pathway activity by lineage

Ranked by sampling consensus. Activity change represents the tumor-versus-normal difference in pathway activity on a log2 scale. Positive values indicate higher pathway activity in tumor tissue. The reported p-values are derived from the corresponding differential activity tests.
LineageGenderStageActivity changepSampling consensus
HNSCAllII,III,IV+0.037<.0019view →
UCECAllAll−0.093<.0018view →
LUSCFemaleAll−0.092<.0018view →
COADFemaleAll−0.050<.0018view →
THCAMaleAll−0.051<.0017view →
KIRCMaleII,III,IV−0.035<.0017view →
KIRPAllAll−0.034<.0017view →
BRCAAllIII,IV−0.108<.0016view →
LUADAllIII,IV−0.055.0063view →
LIHCAllII,III,IV−0.020.0173view →
BLCAMaleAll−0.053.0172view →
KICHAllAll−0.032.0032view →
Pink = more active in tumor, green = less active in tumor. Showing the 12 strongest of 12 lineages.

GO:0045986–HNSC

Tumor-vs-normal pathway-activity box plot for Negative regulation of smooth muscle contraction in HNSC.

Open the HNSC breakdown →

Exploration