Positive regulation of translational initiation

Across TCGA patient cohorts, RNA activity of the Positive regulation of translational initiation pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are NOP56P3, CCDC130, and WFDC3, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of translational initiation activity versus NOP56P3 in BRCA (Pearson r = -0.16).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	NOP56P3 →	-0.881	-0.191	.001	.007	3	5
OV	CCDC130 →	-0.560	-0.126	<.001	<.001	3	4
LUAD	WFDC3 →	-1.023	-0.131	.005	.002	3	4
CCRCC	SERTAD4-AS1 →	-0.822	-0.169	<.001	<.001	3	4
GBM	ARHGEF7 →	-0.399	-0.139	<.001	.001	3	4
GBM	FGF13 →	-0.576	-0.204	.003	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0045948 vs NOP56P3 — BRCA

Explore this scatter interactively →