Positive regulation of steroid metabolic process

pathway activity — cross-omics
GO:0045940Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of steroid metabolic process pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are LTBP2, GGT5, and THBS1, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of steroid metabolic process activity versus LTBP2 in GBM (Pearson r = 0.31).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMLTBP2 →+0.951+0.180<.001<.00135
LSCCGGT5 →+0.804+0.651<.001<.00135
GBMTHBS1 →+1.140+0.158.004<.00135
GBMFOLR2 →+1.004+0.196.001<.00135
GBMC5AR1 →+0.803+0.147.002.00135
LSCCH2AC20 →-0.690-0.692<.001.00235
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0045940 vs LTBP2 — GBM

Per-sample scatter of Positive regulation of steroid metabolic process activity vs LTBP2 in GBM.

Explore this scatter interactively →

Exploration