Negative regulation of DNA recombination

Across TCGA cell cohorts, RNA activity of the Negative regulation of DNA recombination pathway is significantly associated with the RNA expression of multiple genes, with the BLOOD_Leukemia cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MICOS13, PRXL2C, and NSD3, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of DNA recombination activity versus MICOS13 in BLOOD_Leukemia (Pearson r = -0.29).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BLOOD_Leukemia	MICOS13 →	-0.491	-0.098	.001	.008	3	5
BLOOD_Leukemia	PRXL2C →	-1.159	-0.166	.003	<.001	3	4
OESOPHAGUS	NSD3 →	+0.635	+0.238	.008	.005	3	4
BLOOD_Myeloma	CNTNAP2 →	+0.607	+0.301	.002	.004	3	4
BONE	RSPH3 →	+0.922	+0.202	.006	.004	3	4
BLOOD_Leukemia	DTX1 →	+2.308	+0.123	.004	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0045910 vs MICOS13 — BLOOD_Leukemia

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