Negative regulation of sister chromatid cohesion

Across TCGA patient cohorts, RNA activity of the Negative regulation of sister chromatid cohesion pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CXCR2, SGMS2, and CASS4, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of sister chromatid cohesion activity versus CXCR2 in GBM (Pearson r = -0.41).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	CXCR2 →	-0.719	-0.994	<.001	<.001	3	6
BRCA	SGMS2 →	-0.546	-0.436	.003	.004	3	6
GBM	CASS4 →	-0.493	-0.884	<.001	<.001	3	5
GBM	MIR223HG →	-0.800	-0.954	<.001	<.001	3	5
OV	FCGR3B →	-0.991	-0.500	.004	.003	3	5
GBM	CXCR1 →	-0.698	-0.803	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0045875 vs CXCR2 — GBM

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