Development of secondary sexual characteristics

pathway activity — cross-omics
GO:0045136Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Development of secondary sexual characteristics pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are GINS1, PRPSAP1, and SIDT1-AS1, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMGINS1 →+0.771+0.737<.001<.00134
LSCCPRPSAP1 →+0.339+0.122.002.00734
UCECSIDT1-AS1 →-1.297-0.316<.001<.00134
UCECCMSS1 →+0.441+0.220<.001<.00134
UCECSIDT1 →-0.801-0.206.001.00134
GBMBRIP1 →+1.003+0.657<.001.00634
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration