Suppression of viral release by host

pathway activity — cross-omics
GO:0044790Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Suppression of viral release by host pathway is significantly associated with the protein abundance of multiple proteins, with the CCRCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are PPP1R12B, IFIT5, and PML, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Suppression of viral release by host activity versus PPP1R12B in CCRCC (Pearson r = 0.44).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCPPP1R12B →+0.713+0.055<.001<.00137
GBMIFIT5 →+0.533+0.065<.001<.00137
GBMPML →+0.461+0.048<.001<.00137
CCRCCCSRP1 →+0.624+0.035<.001.00136
UCECAIDA →+0.326+0.070<.001<.00136
CCRCCFHL2 →+0.681+0.034<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0044790 vs PPP1R12B — CCRCC

Per-sample scatter of Suppression of viral release by host activity vs PPP1R12B in CCRCC.

Explore this scatter interactively →

Exploration