Multi-multicellular organism process

pathway activity — cross-omics
GO:0044706Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Multi-multicellular organism process pathway is significantly associated with the RNA expression of multiple genes, with the CCRCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are SERPINE1, GIMAP7, and NRIP3, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Multi-multicellular organism process activity versus SERPINE1 in CCRCC (Pearson r = 0.37).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCSERPINE1 →+1.045+0.164.006.00535
HNSCGIMAP7 →-1.037-0.137.005.00335
PDACNRIP3 →+0.497+0.160.002.00335
HNSCTMEM45A →+1.352+0.179.009.00135
LSCCTRAV9-2 →-1.213-0.291.003.00135
HNSCPPP1R16B →-0.788-0.131.005.00534
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0044706 vs SERPINE1 — CCRCC

Per-sample scatter of Multi-multicellular organism process activity vs SERPINE1 in CCRCC.

Explore this scatter interactively →

Exploration