Relaxation of smooth muscle

pathway activity & survival
GO:0044557SurvivalRNA activityKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, RNA activity of the Relaxation of smooth muscle pathway is associated with patient survival in 21 of 34 cancer lineages. Pathway activity is summarized from the expression of its 9 member genes.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where higher Relaxation of smooth muscle pathway activity is associated with poorer overall survival. In most high-consensus cancer types, elevated pathway activity shows an unfavorable survival association, although some cancer types, such as LGG and UCS, show the opposite pattern, with higher activity associated with better survival.

KIRC, THYM, and COAD are the cancer lineages in which this pathway most reproducibly stratifies patient survival.

Pathway-activity survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 represent the survival AUCs for the high- and low-pathway-activity groups, respectively. The group with the lower AUC is interpreted as having poorer survival. The reported p-values are derived from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCOSTertileAll0.5010.677<.00154view →
THYMDFSTertileAll0.5270.903.00153view →
COADDFSMedianIII,IV0.5630.745.00149view →
LGGDFSMedianAll0.5070.312<.00137view →
CESCOSTertileIV0.1030.720.00836view →
STADDFSTertileIV0.1710.670.01126view →
UCSOSTertileIV0.8980.359.02424view →
UCECOSTertileAll0.9010.950.01720view →
HNSCDFSMedianIII,IV0.4710.176.00718view →
ESCADFSQuartileIII,IV0.6460.303.00215view →
TGCTDFSMedianAll0.7460.905.01712view →
DLBCDFSTertileII,III,IV0.2110.892.02510view →
Pink = unfavorable, green = favorable. Showing the 12 strongest of 21 lineages.

GO:0044557–KIRC (OS)

Kaplan–Meier survival curve for Relaxation of smooth muscle pathway activity in KIRC.

Open the KIRC breakdown →

Exploration