Fibroblast apoptotic process

pathway activity — cross-omics
GO:0044346Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Fibroblast apoptotic process pathway is significantly associated with the protein abundance of multiple proteins, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are ANKRD44, ARHGAP25, and KCNAB2, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCANKRD44 →+0.371+0.075.001.00538
BRCAARHGAP25 →+0.477+0.043<.001<.00138
CCRCCKCNAB2 →+0.302+0.040<.001<.00137
HNSCFLNB →-0.536-0.084<.001<.00136
CCRCCSASH3 →+0.327+0.039<.001<.00136
OVSTK4 →+0.411+0.053<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration