Fibroblast apoptotic process

pathway activity — cross-omics
GO:0044346Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Fibroblast apoptotic process pathway is significantly associated with the RNA expression of multiple genes, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are ASF1B, SPATA9, and GOLGA7, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCASF1B →+0.629+0.470.002.00134
PDACSPATA9 →+0.223+0.612.002<.00133
PDACGOLGA7 →+0.230+0.530.006.00833
PDACESCO2 →+0.354+0.422<.001.00333
UCECSH3BP1 →+0.476+0.531.002.00433
UCECCAPNS1P1 →+0.227+0.587.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration