Obsolete histone H4-K16 acetylation

pathway activity — cross-omics
GO:0043984Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete histone H4-K16 acetylation pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are RPL28, RPL7, and CACNA2D1, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMRPL28 →-0.350-0.040.004.00835
GBMRPL7 →-0.352-0.052.004.00435
HNSCCACNA2D1 →+0.689+0.067<.001.00635
OVSORBS1 →+0.571+0.042<.001.00235
OVEEF2_T57 →-0.734-0.032.002.00535
LUADAUTS2_S1198 →+0.824+0.062<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration