Obsolete histone H4 acetylation

pathway activity — cross-omics
GO:0043967Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete histone H4 acetylation pathway is significantly associated with the protein abundance of multiple proteins, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are CSNK1A1, DAXX, and RPL3, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCCSNK1A1 →-0.662-0.119<.001<.00136
UCECDAXX →+0.220+0.086.004<.00135
HNSCRPL3 →-0.289-0.092<.001<.00135
HNSCTIMM17A →-0.381-0.093<.001.00135
HNSCRPL24 →-0.368-0.091<.001<.00135
LSCCRPL4 →-0.208-0.052.009.00235
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration