Regulation of cAMP-mediated signaling

pathway activity — cross-omics
GO:0043949Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of cAMP-mediated signaling pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are PDE1A, EDNRA, and JAM3, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPDE1A →+0.903+0.778<.001<.00136
BRCAEDNRA →+0.899+0.439<.001<.00135
CCRCCJAM3 →+1.065+0.383<.001<.00135
LUADPDE3A →+0.889+0.258.002.00735
CCRCCPRKG1 →+0.686+0.283<.001.00135
UCECMIR100HG →+0.999+0.160<.001.00635
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration