Obsolete exonucleolytic catabolism of deadenylated mRNA

pathway activity — cross-omics
GO:0043928Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete exonucleolytic catabolism of deadenylated mRNA pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are SUSD1, ATAD5, and TTC24, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCASUSD1 →+0.499+0.202.001.00233
BRCAATAD5 →+0.416+0.153.004.00233
BRCATTC24 →+0.317+0.141.003.00933
BRCAIGHJ1 →+1.878+0.161<.001.00533
BRCALINC00402 →+0.238+0.197.006.00133
BRCADCAF13P1 →-0.284-0.161.004.00333
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration